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Home page
Getting started
User account
Learners corner
Main window overview
Processing wizard
Data conversion
Performance options
Command line tool (batch mode)
Integration to other tools
Citations
Processing modules
Processing modules
- I/O
  I/O
- File merging
  File merging
  - Raw data files merging
  - Mobility scan merging
- Raw data filtering
  Raw data filtering
- Mass detection
  Mass detection
- LC-MS feature detection
  LC-MS feature detection
- LC-IMS-MS feature detection
  LC-IMS-MS feature detection
- MS imaging feature detection
  MS imaging feature detection
  - Image builder
- Smoothing
- Resolving
  Resolving
- Spectral deconvolution (GC)
  Spectral deconvolution (GC)
  - Hierarchical clustering
  - Multivariate curve resolution
- CCS calibration
- MS2 scan pairing
- MALDI MS2 scan pairing (SIMSEF)
- Isotope filtering
  Isotope filtering
- Feature grouping
  Feature grouping
  - Correlation grouping
  - Ion identity networking
- Feature list filtering
  Feature list filtering
- Alignment
  Alignment
- Gap filling
  Gap filling
  - Peak finder
  - Same RT and m/z range gap filler
- Normalization
  Normalization
- Precursor mass search
  Precursor mass search
- Spectra search
  Spectra search
- Other parameters
  Other parameters
  - Merge MS/MS
  - Spectra similarity
Visualization modules
Visualization modules
- Visualization overview
- MS data visualisation
  MS data visualisation
  - Raw data overview
  - Additional tools
- Ion mobility data visualisation
- Image viewer
- Image co-localization
- Processed data visualition
  Processed data visualition
- Massvoltammogram
Workflows
Workflows
Tools
Tools
- SIMSEF scheduler
Additional resources
Additional resources
Contribute
Contribute
Acknowledgements
Troubleshooting
Changelog
Workshops

Citations¶

How to cite different parts of MZmine: Workflows, tools, etc.

Last update: October 20, 2022 16:56:06

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