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Data export

Description

Export scans - Spectra/mass list to mgf, txt, msp and mzML export

This module exports scans or mass lists. MZmine allows several types of data export:

  • to *.mzML,
  • to *.netCDF,
  • spectra/mass list to mgf, txt, msp and mzML export,
  • MS(n) trees export.

Parameters

Raw data files

One or more raw data files that contain the scans/mass lists

Scan filters

See Scan selection filters for all available criteria and combination rules.

Optional mass list

If checked, mass lists are exported instead of raw scans

File

The destination

Format

  • mgf: MASCOT generic format - useful for SIRIUS

  • txt: Plain text format

  • msp: NIST search format

  • mzML: Open format standard for MS data

Steffen Heuckeroth, omokshyna