The following documentation is available for getting familiar with MZmine 2 and its architecture. If you have further questions regarding the usage or development of MZmine, please contact the developers
MZmine 2 manual
This manual covers the general functionality of MZmine 2 including installation, batch mode and data processing.
ADAP feature detection manual
This manual covers the ADAP feature detection method.
This animated tutorial created by Sandra Castillo introduces the basic features of MZmine 2, including raw data import, peak detection, visualization of results etc.
This tutorial written by Mark Earll covers the data processing features of MZmine 2.
How to start MZmine development
This tutorial shows how to setup the development environment using the Eclipse IDE and how to start developing modules for MZmine 2 & MZmine 3.
Module development tutorial
This (slighly outdated) tutorial is intended for researchers who wish to implement their own data processing methods within the MZmine 2 framework. It covers the development of a simple MZmine 2 module.